abandon statistical significance

An exchange between A. Gelman and D. Mayo on abandoning statistical significance: 5 years ago

.

Below is an email exchange that Andrew Gelman posted on this day 5 years ago on his blog, Statistical Modeling, Causal Inference, and Social Science.  (You can find the original exchange, with its 130 comments, here.) Note: “Me” refers to Gelman. I will share my current reflections in the comments.

Exchange with Deborah Mayo on abandoning statistical significance

Continue reading

Categories: 5-year memory lane, abandon statistical significance, Gelman blogs an exchange with Mayo | 4 Comments

Georgi Georgiev (Guest Post): “The frequentist vs Bayesian split in online experimentation before and after the ‘abandon statistical significance’ call”

.

Georgi Georgiev

  • Author of Statistical methods in online A/B testing
  • Founder of Analytics-Toolkit.com
  • Statistics instructor at CXL Institute

In online experimentation, a.k.a. online A/B testing, one is primarily interested in estimating if and how different user experiences affect key business metrics such as average revenue per user. A trivial example would be to determine if a given change to the purchase flow of an e-commerce website is positive or negative as measured by average revenue per user, and by how much. An online controlled experiment would be conducted with actual users assigned randomly to either the currently implemented experience or the changed one. Continue reading

Categories: A/B testing, abandon statistical significance, optional stopping | Tags: | 25 Comments

Andrew Gelman (Guest post): (Trying to) clear up a misunderstanding about decision analysis and significance testing

.

Professor Andrew Gelman
Higgins Professor of Statistics
Professor of Political Science
Director of the Applied Statistics Center
Columbia University

 

(Trying to) clear up a misunderstanding about decision analysis and significance testing

Background

In our 2019 article, Abandon Statistical Significance, Blake McShane, David Gal, Christian Robert, Jennifer Tackett, and I talk about three scenarios: summarizing research, scientific publication, and decision making.

In making our recommendations, we’re not saying it will be easy; we’re just saying that screening based on statistical significance has lots of problems. P-values and related measures are not useless—there can be value in saying that an estimate is only 1 standard error away from 0 and so it is consistent with the null hypothesis, or that an estimate is 10 standard errors from zero and so the null can be rejected, or than an estimate is 2 standard errors from zero, which is something that we would not usually see if the null hypothesis were true. Comparison to a null model can be a useful statistical tool, in its place. The problem we see with “statistical significance” is when this tool is used as a dominant or default or master paradigm: Continue reading

Categories: abandon statistical significance, gelman, statistical significance tests, Wasserstein et al 2019 | 29 Comments

Aris Spanos Guest Post: “On Frequentist Testing: revisiting widely held confusions and misinterpretations”

.

Aris Spanos
Wilson Schmidt Professor of Economics
Department of Economics
Virginia Tech

The following guest post (link to PDF of this post) was written as a comment to Mayo’s recent post: “Abandon Statistical Significance and Bayesian Epistemology: some troubles in philosophy v3“.

On Frequentist Testing: revisiting widely held confusions and misinterpretations

After reading chapter 13.2 of the 2022 book Fundamentals of Bayesian Epistemology 2: Arguments, Challenges, Alternatives, by Michael G. Titelbaum, I decided to write a few comments relating to his discussion in an attempt to delineate certain key concepts in frequentist testing with a view to shed light on several long-standing confusions and misinterpretations of these testing procedures. The key concepts include ‘what is a frequentist test’, ‘what is a test statistic and how it is chosen’, and ‘how the hypotheses of interest are framed’. Continue reading

Categories: abandon statistical significance, Spanos | 13 Comments

Guest Post: Yudi Pawitan: “Update on Behavioral aspects in the statistical significance war-game (‘abandon statistical significance 5 years on’)

.

Professor Yudi Pawitan
Department of Medical Epidemiology and Biostatistics
Karolinska Institutet, Stockholm, Sweden

[An earlier guest post on this topic by Y. Pawitan is Jan 10, 2022: Yudi Pawitan: Behavioral aspects in the statistical significance war-game]

Behavioral aspects in the statistical significance war-game

I remember with fondness the good old days when the only ‘statistical war’-game was fought between the Bayesian and the frequentist. It was simpler and the participants were for the most part collegial. Moreover, there was a feeling that it was a philosophical debate. Even though the Bayesian-frequentist war is not fully settled, we can see areas of consensus, for example in objective Bayesianism or in conditional inference. However, on the P-value and statistical significance front, the war looks less simple since it is about statistical praxis; it is no longer Bayesian vs frequentist, with no consensus in sight and with wide implications affecting the day-to-day use of statistics. Continue reading

Categories: abandon statistical significance, game-theoretic analyses, Wasserstein et al. (2019) | 12 Comments

Guest Post: John Park: Abandoning P-values and Embracing Artificial Intelligence in Medicine (thoughts on “abandon statistical significance 5 years on”)

.

John Park, MD
Medical Director of Radiation Oncology
North Kansas City Hospital
Clinical Assistant Professor
Univ. Of Missouri-Kansas City

[An earlier post  by J. Park on this topic: Jan 17, 2022: John Park: Poisoned Priors: Will You Drink from This Well? (Guest Post)]

Abandoning P-values and Embracing Artificial Intelligence in Medicine

The move to abandon P-values that started 5 years ago was, as we say in medicine, merely a symptom of a deeper more sinister diagnosis. Within medicine, the diagnosis was a lack of statistical and philosophical knowledge. Specifically, this presented as an uncritical move towards Bayesianism away from frequentist methods, that went essentially unchallenged. The debate between frequentists and Bayesians, though longstanding, was little known inside oncology. Out of concern, I sought a collaboration with Prof. Mayo, which culminated into a lecture given at the 2021 American Society of Radiation Oncology meeting. The lecture included not only representatives from frequentist and Bayesian statistics, but another interesting guest that was flying under the radar in my field at that time… artificial intelligence (AI). Continue reading

Categories: abandon statistical significance, Artificial Intelligence/Machine Learning, oncology | 21 Comments

Guest Post: Ron Kenett: What’s happening in statistical practice since the “abandon statistical significance” call

.

Ron S. Kenett
Chairman of the KPA Group;
Senior Research Fellow, the Samuel Neaman Institute, Technion, Haifa;
Chairman, Data Science Society, Israel

 

What’s happening in statistical practice since the “abandon statistical significance” call

This is a retrospective view from experience gained by applying statistics to a wide range of problems, with an emphasis on the past few years. The post is kept at a general level in order to provide a bird’s eye view of the points being made. Continue reading

Categories: abandon statistical significance, Wasserstein et al 2019 | 26 Comments

Guest Post (part 2 of 2): Daniël Lakens: “How were we supposed to move beyond  p < .05, and why didn’t we?”

.

Professor Daniël Lakens
Human Technology Interaction
Eindhoven University of Technology

[Some earlier posts by D. Lakens on this topic are at the end of this post]*

This continues Part 1:

4: Most do not offer any alternative at all

At this point, it might be worthwhile to point out that most of the contributions to the special issue do not discuss alternative approaches to p < .05 at all. They discuss general problems with low quality research (Kmetz, 2019), the importance of improving quality control (D. W. Hubbard & Carriquiry, 2019), results blind reviewing (Locascio, 2019), or the role of subjective judgment (Brownstein et al., 2019). There are historical perspectives on how we got to this point (Kennedy-Shaffer, 2019), ideas about how science should work instead, many stressing the importance of replication studies (R. Hubbard et al., 2019; Tong, 2019). Note that Trafimow both recommends replication as an alternative (Trafimow, 2019), but also co-authors a paper stating we should not expect findings to replicate (Amrhein et al., 2019), thereby directly contradicting himself within the same special issue. Others propose not simply giving up on p-values, but on generalizable knowledge (Amrhein et al., 2019). The suggestion is to only report descriptive statistics. Continue reading

Categories: abandon statistical significance, D. Lakens, Wasserstein et al 2019 | 13 Comments

Guest Post: “Daniël Lakens: How were we supposed to move beyond  p < .05, and why didn’t we? “(part 1 of 2):

.

Professor Daniël Lakens
Human Technology Interaction
Eindhoven University of Technology

*[Some earlier posts by D. Lakens on this topic are listed at the end of part 2, forthcoming this week]

How were we supposed to move beyond  p < .05, and why didn’t we?

It has been 5 years since the special issue “Moving to a world beyond p < .05” came out (Wasserstein et al., 2019). I might be the only person in the world who has read all 43 contributions to this special issue. [In part 1] I will provide a summary of what the articles proposed we should do instead of p < .05, and [in part 2] offer some reflections on why they did not lead to any noticeable change. Continue reading

Categories: abandon statistical significance, D. Lakens, Wasserstein et al. (2019) | 23 Comments

Guest Post: Christian Hennig: “Statistical tests in five random research papers of 2024, and related thoughts on the ‘don’t say significant’ initiative”

.

Professor Christian Hennig
Department of Statistical Sciences “Paolo Fortunati”
University of Bologna

[An earlier post by C. Hennig on this topic:  Jan 9, 2022: The ASA controversy on P-values as an illustration of the difficulty of statistics]

Statistical tests in five random research papers of 2024, and related thoughts on the “don’t say significant” initiative

This text follows an invitation to write on “abandon statistical significance 5 years on”, so I decided to do a tiny bit of empirical research. I had a look at five new papers listed on May 17 on the “Research Articles” site of Scientific Reports. I chose the most recent five papers when I looked without being selective. As I “sampled” papers for a general impression, I don’t want this to be a criticism of particular papers or authors, however in the interest of transparency, the doi addresses of the papers are: Continue reading

Categories: 5-year memory lane, abandon statistical significance, Christian Hennig | 7 Comments

Guest Post: Andrea Saltelli: Analytic flexibility: a badly kept secret? (thoughts on “abandon statistical significance 5 years on”)

.

.

Professor Andrea Saltelli
UPF Barcelona School of Management, Barcelona, Spain, Centre for the Study of the Sciences and the Humanities, University of Bergen, Bergen, Norway

[An earlier post by A. Saltelli on this topic: Nov 22, 2019: A. Saltelli (Guest post): What can we learn from the debate on statistical significance?]

Analytic flexibility: a badly kept secret?

In a previous post in this blog I expressed concern about a loss of trust that could incur the activity of scientific quantification – as practiced in several discipline – unless some technical and normative element of crisis could be managed. The piece warned that the phenomenon could lead to “a decline of public trust in the findings of science”. Five years and one pandemic later, we may wonder if the danger has indeed materialized. Continue reading

Categories: abandon statistical significance | Tags: , , , | 11 Comments

2-4 year review: The Statistics Wars and Intellectual Conflicts of Interest

.

Before posting new reflections on where we are 5 years after the ASA P-value controversy–both my own and readers’–I will reblog some reader commentaries from 2022 in connection with my (2022) editorial in Conservation Biology: “The Statistical Wars and Intellectual Conflicts of Interest”. First, here are excerpts from my editorial: Continue reading

Categories: 3-year memory lane, abandon statistical significance, stat activist watch 2023, stat wars and their casualties | Leave a comment

5-year review: Hardwicke and Ioannidis, Gelman, and Mayo: P-values: Petitions, Practice, and Perils

 

.

Soon after the Wasserstein et al (2019) “don’t say significance” editorial, John Ioannidis invited Andrew Gelman and I to write editorials from our different perspectives on an associated editorial that Nature invited. It was written by Amrhein, Greenland and McShane (AGM, 2019). Prior to the publication of AGM 2019, people were given the opportunity to add their names to the Nature article.

A campaign followed that aimed at the collection of signatures in what was called a ‘petition’ on the widely popular blogsite of Andrew Gelman. Ultimately, 854 scientists signed the petition and the list of their names was published along with commentary. (Hardwicke and Ioannidis, 2019, p. 2)

Tom Hardwicke and John Ioannidis (2019) took advantage of the opportunity “to perform a survey of the signatories to understand how and why they signed the endorsement” (ibid.). This post, reblogged from September 25 2019, includes all 3 articles: the survey by Hardwicke and Ioannidis, and the editorials by Gelman and I. They appeared in the European Journal of Clinical Investigations (2019). I’m still interested in reader responses (in the comments) to the question I pose. Continue reading

Categories: 5-year memory lane, abandon statistical significance | Leave a comment

5-year Review: B. Haig: [TAS] 2019 update on P-values and significance (ASA II)(Guest Post)

This is the guest post by Bran Haig on July 12, 2019 in response to the “abandon statistical significance” editorial in The American Statistician (TAS) by Wasserstein, Schirm, and Lazar (WSL 2019). In the post it is referred to as ASAII with a note added once we learned that it is actually not a continuation of the 2016 ASA policy statement. (I decided to leave it that way, as otherwise the context seems lost. But in the title to this post, I refer to the journal TAS.) Brian lists some of the benefits that were to result from abandoning statistical significance. I welcome your constructive thoughts in the comments.

Brian Haig, Professor Emeritus
Department of Psychology
University of Canterbury
Christchurch, New Zealand Continue reading

Categories: 5-year memory lane, abandon statistical significance, ASA Guide to P-values, Brian Haig | Tags: | Leave a comment

5-year review: The NEJM Issues New Guidelines on Statistical Reporting: Is the ASA P-Value Project Backfiring? (i)

In a July 19, 2019 post I discussed The New England Journal of Medicine’s response to Wasserstein’s (2019) call for journals to change their guidelines in reaction to the “abandon significance” drive. The NEJM said “no thanks” [A]. However confidence intervals CIs got hurt in the mix. In this reblog, I kept the reference to “ASA II” with a note, because that best conveys the context of the discussion at the time. Switching it to WSL (2019) just didn’t read right. I invite your comments. Continue reading

Categories: 5-year memory lane, abandon statistical significance, ASA Guide to P-values | 6 Comments

5-year review: Don’t let the tail wag the dog by being overly influenced by flawed statistical inferences

.

On June 1, 2019, I posted portions of an article [i],“There is Still a Place for Significance Testing in Clinical Trials,” in Clinical Trials responding to the 2019 call to abandon significance. I reblog it here. While very short, it effectively responds to the 2019 movement (by some) to abandon the concept of statistical significance [ii]. I have recently been involved in researching drug trials for a condition of a family member, and I can say that I’m extremely grateful that they are still reporting error statistical assessments of new treatments, and using carefully designed statistical significance tests with thresholds. Without them, I think we’d be lost in a sea of potential treatments and clinical trials. Please share any of your own experiences in the comments. The emphasis in this excerpt is mine: 

Much hand-wringing has been stimulated by the reflection that reports of clinical studies often misinterpret and misrepresent the findings of the statistical analyses. Recent proposals to address these concerns have included abandoning p-values and much of the traditional classical approach to statistical inference, or dropping the concept of statistical significance while still allowing some place for p-values. How should we in the clinical trials community respond to these concerns? Responses may vary from bemusement, pity for our colleagues working in the wilderness outside the relatively protected environment of clinical trials, to unease about the implications for those of us engaged in clinical trials…. Continue reading

Categories: 5-year memory lane, abandon statistical significance, statistical tests | 9 Comments

Blog at WordPress.com.